topTraits {gwascat} | R Documentation |
operations on GWAS catalog
topTraits(gwwl, n = 10, tag = "DISEASE/TRAIT")
gwwl |
instance of |
n |
numeric, number of traits to report |
tag |
character, name of field to be used for trait enumeration |
topTraits
returns a character vector of most frequently
occurring traits in the database
locs4trait
returns a {gwaswloc}
object with
records defining associations to the specified trait
chklocs
returns a logical that is TRUE when the asserted locations of
SNP in the GWAS catalog agree with the locations given in the dbSNP package
SNPlocs.Hsapiens.dbSNP144.GRCh37
VJ Carey <stvjc@channing.harvard.edu>
data(ebicat_2020_04_30) topTraits(ebicat_2020_04_30)