calculate.combined.score {glmSparseNet}R Documentation

Calculate combined score for STRINGdb interactions

Description

Please note that all the interactions have duplicates as it's a two way interaction (score(ProteinA-Protein) == score(ProteinB, PorteinA))

Usage

calculate.combined.score(all.interactions, score_threshold, remove.text)

Arguments

all.interactions

table with score of all interactions

score_threshold

threshold to keep interactions

remove.text

remove text-based interactions

Details

To better understand how the score is calculated, please see: https://string-db.org/help/faq/#how-are-the-scores-computed

Value

table with combined score


[Package glmSparseNet version 1.10.0 Index]