plot.epiScreen {epiNEM} | R Documentation |
Plots the sresults of a systematic knock-out screen
## S3 method for class 'epiScreen' plot( x, global = TRUE, ind = NULL, colorkey = TRUE, cexGene = 1, off = 0.05, cexLegend = 1, ... )
x |
object of class epiScreen |
global |
plot global distribution or for each pair (FALSE) |
ind |
index of pairs to plot |
colorkey |
if TRUE prints colorkey |
cexGene |
size of modulator annotation |
off |
relative distance from the gene names to the respective likelihoods |
cexLegend |
font size of the legend |
... |
other arguments |
plot(s) of an epiNEM screen analysis
data <- matrix(sample(c(0,1), 100*9, replace = TRUE), 100, 9) colnames(data) <- c("A.B", "A.C", "B.C", "A", "B", "C", "D", "E", "G") rownames(data) <- paste("E", 1:100, sep = "_") res <- epiScreen(data) plot(res) plot(res, global = FALSE, ind = 1:3)