CreateExtendedAdjacency {epiNEM} | R Documentation |
extend adjacency matrices taking cycles and logics into account. For every given start state, the final state is computed yu using BoolNet.
CreateExtendedAdjacency(network, mutants, experiments)
network |
network created by BoolNet from file |
mutants |
vector of single knockouts |
experiments |
vector of all knockouts |
extended adjacency matrix
library(BoolNet) data(cellcycle) extModel <- CreateExtendedAdjacency(cellcycle, c(cellcycle$genes, "CycD.Rb"), cellcycle$genes)