plotVariability {chromVAR} | R Documentation |
plot variability of motifs/etc
plotVariability(variability, xlab = "Sorted TFs", n = 3, labels = variability$name, use_plotly = interactive())
variability |
output from |
xlab |
label for x-axis (default is 'Sorted TFs') |
n |
number of toppoints to label? |
labels |
names of sets. if not given, uses rownames of variability |
use_plotly |
make plot interactive (using plotly) |
ggplot or plotly object, depending on whether use_plotly is TRUE
Alicia Schep
# Load very small example results from computeDeviations data(mini_dev, package = "chromVAR") variability <- computeVariability(mini_dev) var_plot <- plotVariability(variability, use_plotly = FALSE)