calculate_fc {SplicingFactory} | R Documentation |
Calculate splicing diversity changes between two conditions.
calculate_fc(x, samples, control, method = "mean")
x |
A |
samples |
Character vector with an equal length to the number of columns in the input dataset, specifying the category of each sample. |
control |
Name of the control sample category, defined in the
|
method |
Method to use for calculating the average splicing diversity
value in a condition. Can be |
The function uses a matrix of splicing diversity values in order to calculate mean or median differences and log2 fold changes between two conditions.
A data.frame
with mean or median value of splicing diversity
across sample categories, the difference between these values and the log2
fold change values.