runErrorModel {SpatialDecon} | R Documentation |
Based on raw counts, uses past data to estimate each raw count's log-scale SD from technical noise. Specifies different error models for different platforms.
runErrorModel(counts, platform = "general")
counts |
vector or matrix of raw counts |
platform |
String specifying which platform was used to create "rawCounts". Default to "dsp". Other options include "ncounter", "rsem" and "quantile". |
a matrix of log2-scale SDs