matchPEroles {ReactomeGraph4R} | R Documentation |
This function retrieves the role(s) of a given PhysicalEntity including:
Input
Output
Regulator
Catalyst
matchPEroles( pe.id = NULL, pe.displayName = NULL, species = NULL, type = c("row", "graph") )
pe.id |
stId or dbId of a PhysicalEntity |
pe.displayName |
displayName of a PhysicalEntity |
species |
name or taxon id or dbId or abbreviation of a species |
type |
return results as a list of dataframes ('row'), or as a graph object ('graph') |
information of the given PhysicalEntity and its role(s)
Other match:
matchDiseases()
,
matchHierarchy()
,
matchInteractors()
,
matchObject()
,
matchPaperObjects()
,
matchPrecedingAndFollowingEvents()
,
matchReactionsInPathway()
,
matchReferrals()
stId <- "R-HSA-8944354" # matchPEroles(pe.id = stId, type = "graph") # matchPEroles(pe.displayName = "2SUMO1:MITF [nucleoplasm]", # species = "pig", type = "row")