setNodeWeights {ROntoTools} | R Documentation |
Set node weights
setNodeWeights(graphList, weights = NULL, defaultWeight = 1)
graphList |
a list of |
weights |
named vector or matrix; if vector, the node is going to have the same weight in all graphs it appears; if matrix, the rows represent nodes and columns represent graphs and the node will have different weights in each pathway |
defaultWeight |
the default weight for all nodes not set by the parameter |
The graphList
with the node weights set.
Calin Voichita and Sorin Draghici
# load the set of pathways kpg <- keggPathwayGraphs("hsa") kpg <- setNodeWeights(kpg) nodeWeights(kpg[["path:hsa04110"]])