init_gmql {RGMQL} | R Documentation |
It initializes and runs GMQL server for executing GMQL query. It also performs a login to GMQL REST services suite, if needed
init_gmql( output_format = "GTF", remote_processing = FALSE, url = NULL, username = NULL, password = NULL )
output_format |
string that identifies the output format of all sample files. It can be TAB, GTF or COLLECT:
|
remote_processing |
logical value specifying the processing mode. True for processing on cluster (remote), false for local processing. |
url |
string url of server: It must contain the server address
and base url; service name is added automatically.
If NULL, no login is performed.
You can always perform it by calling the function |
username |
string name used during remote server signup |
password |
string password used during remote server signup |
None
## This statement initializes GMQL with local processing with sample files ## output format as tab-delimited init_gmql("tab", FALSE) ## This statement initializes GMQL with remote processing remote_url = "http://www.gmql.eu/gmql-rest/" init_gmql(remote_processing = TRUE, url = remote_url)