plot_inter {Pviz} | R Documentation |
Plot frequency of response for each group
Description
Plot an axis and the frequency of response of each group, averaged by peptides
at each position.
Usage
plot_inter(restab, sequence = NULL, from = 0, to = max(restab$position),
...)
Arguments
restab |
A data.frame . The result of a peptide microarray
analysis, as returned by pepStat 's restab function.
|
sequence |
A character or an AAString . If not NULL, the
sequence of the ProteinSequenceTrack to plot. It should be the
sequence of the reference genome used in the peptideSet that
generated the restab .
|
from |
A numeric , the start coordinate of the plot.
|
to |
A numeric , the end coordinate of the plot.
|
... |
Aditional arguments to be passed to plotTracks .
|
Author(s)
Renan Sauteraud
See Also
restab
, plot_clade
, plotTracks
Examples
if(require(pepDat)){
data(restab_aggregate)
plot_inter(restab_aggregate)
}
[Package
Pviz version 1.26.0
Index]