predictClasses,SurvivalExperiment,GeneFuModel-method {PDATK} | R Documentation |
genefu
Package
to Predict Signature Scores for Each Sample.Use a Gene Signature Based Prediciton Model from the genefu
Package
to Predict Signature Scores for Each Sample.
## S4 method for signature 'SurvivalExperiment,GeneFuModel' predictClasses(object, model, ..., annot = NA)
object |
A |
model |
A |
... |
Fall through parameters to |
annot |
A named parameter with annotations mapping from the gene identifiers in the genefu model. |
A signature score should be interpreted as unit-less continuous risk predictor.
The SurvivalExperiment
passed to the object
argument with
the genefu_score
column added to the objects colData
slot.