runGSEA,PCOSP,data.frame-method {PDATK} | R Documentation |
PCOSP
Model Object.Run Gene Set Enrichment Analysis On A PCOSP
Model Object.
## S4 method for signature 'PCOSP,data.frame' runGSEA(object, geneSet, numModels, ..., adjMethod = "fdr", allResults = FALSE)
object |
A |
geneSet |
A |
numModels |
The number of models to use when selecting the top features
from the PCOSP model in |
... |
Force subsequent parameters to be named. Not used. |
adjMethod |
An optional parameter specifying the multiple testing
correction to use in |
allResults |
Return the full results from |
A data.table
containing the significantly enriched gene sets.