PipeR {Oscope} | R Documentation |
Calculate residual of polynomial fit
PipeR(Data,Ndg=3,Method="Poly")
Data |
gene-by-sample matrix or isoform-by-sample matrix.It should be rescaled to values bwteen [-1,1]. |
Ndg |
degree of polynomial. |
Method |
only polynomial fitting ("Poly") is available now. |
The function will fit polynomial curve to each row of the data. The output returns the MSE of each row (gene/isoform).
Ning Leng
aa <- sin(seq(0,1,.1)) bb <- sin(seq(0.5,1.5,.1)) cc <- sin(seq(0.9,1.9,.1)) res <- PipeR(rbind(aa,bb,cc))