TBL2_HS_gen {MiRaGE}R Documentation

The target genes table for human miRNAs

Description

This function generates target gene tables for human miRNAs base upon simple seed match toward 3' UTR of target genes

Usage

TBL2_HS_gen(SP="hsa",destdir="./")

Arguments

SP

Three characters string which describe human. Default is "hsa".

destdir

Directory where "TBL2_HS" is saved. Default is "./".

Details

This function generates target gene tables for human miRNAs, used in the MiRaGE server described in Yoshizawa et al (2011). It saves data frame "TBL2" as the name of "TBL2_HS" in the destination directory.

References

Yoshizawa, M., Taguchi, Y-h., and Yasuda, J. (2011), Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method. Int J Mol Sci 12(12):9265-9276

Examples

## Not run: TBL2_HS_gen()

[Package MiRaGE version 1.34.0 Index]