kda2cytoscape.colormap {Mergeomics} | R Documentation |
kda2cytoscape.colormap
takes number of the modules and assigns a
particular color to each module. Returns the color list (palette).
kda2cytoscape.colormap(ncolors)
ncolors |
number of the unique modules |
palette |
color list: one color is assigned to each module |
Zeyneb Kurt
Shu L, Zhao Y, Kurt Z, Byars SG, Tukiainen T, Kettunen J, Orozco LD, Pellegrini M, Lusis AJ, Ripatti S, Zhang B, Inouye M, Makinen V-P, Yang X. Mergeomics: multidimensional data integration to identify pathogenic perturbations to biological systems. BMC genomics. 2016;17(1):874.
color.number = 5 ## let us assume we have 5 modules, assign 1 color to each: palette <- kda2cytoscape.colormap(color.number)