example.gbm.mae {MOMA}R Documentation

Glioblastoma (GBM) Example Dataset

Description

MultiAssayExperiment Object containing all the genomic assays needed to run the example code for MOMA

Usage

example.gbm.mae

Format

An MultiAssayExperiment object with 4 different sets of GBM assays

viper

matrix of viper scores with samples in columns and regulators across the rows

mut

matrix of samples and genes with potential mutations. 0 for no mutation, 1 for presence of some non-silent mutation

cnv

matrix of samples and genes with copy number variant scores


[Package MOMA version 1.4.0 Index]