spectralTStudent {MAIT} | R Documentation |
Function spectralTStudent takes a MAIT-class
object and obtains which of the variables are significant given a p-value threshold when there only are two classes in the raw data. The parameters of the significant features can be printed to an output table (TRUE by default).
spectralTStudent(MAIT.object = NULL, pvalue = 0.05, p.adj = "none", printCSVfile = TRUE)
MAIT.object |
A MAIT-class object where function peakAggregation has already been applied. The output of the function is going to be an update of the same MAIT-class object. |
pvalue |
P-value threshold. Variables having a p-value lower than this value is considered as a significant variable. |
p.adj |
Character with the name of the posthoc method to be applied to correct the pvalues. The supported methods are that of the p.adjust function |
printCSVfile |
Set to TRUE if an output table has to be produced. See function sigPeaksTable for more information. |
A MAIT-class object containing the significant features of the scores slot of MAIT-class object used as an input.
Francesc Fernandez, francesc.fernandez.albert@upc.edu
spectralSigFeatures
sigPeaksTable