findCorFromLoops {InTAD} | R Documentation |
This function combines genes and signals using obtained loop connections.
findCorFromLoops(object, method = "pearson", adj.pval = FALSE)
object |
InTADSig object with signals and genes combined via loops |
method |
Correlation method: "pearson" (default), "kendall", "spearman" |
adj.pval |
Perform p-value adjsutment and include q-values in result |
A table with correlation values for signal-gene pairs including correlation p-value and euclidian distance.