hlaLociInfo {HIBAG} | R Documentation |
To get the starting and ending positions in basepair of HLA/KIR loci.
hlaLociInfo(assembly=c("auto", "auto-silent", "hg18", "hg19", "hg38", "unknown"))
assembly |
the human genome reference: "hg18", "hg19" (default), "hg38"; "auto" refers to "hg19"; "auto-silent" refers to "hg19" without any warning |
Return a data frame include the genomic locations.
Xiuwen Zheng
GeneCards: https://www.genecards.org/cgi-bin/carddisp.pl?gene=, NCBI Resources: http://www.ncbi.nlm.nih.gov/gene, HLA Nomenclature: http://hla.alleles.org/genes/index.html
hlaLociInfo()