getList {GeneOverlap} | R Documentation |
The listA and listB slots hold the gene lists A and B as character vectors.
## S4 method for signature 'GeneOverlap' getListA(object) ## S4 replacement method for signature 'GeneOverlap' setListA(object) <- value ## S4 method for signature 'GeneOverlap' getListB(object) ## S4 replacement method for signature 'GeneOverlap' setListB(object) <- value
object |
A GeneOverlap object. |
value |
A character vector representing gene names. |
After setListX function is called, the tested Boolean label will be reset to false.
A character vector representing gene list A/B.
GeneOverlap-class
, newGeneOverlap
data(GeneOverlap) go.obj <- newGeneOverlap(hESC.ChIPSeq.list$H3K4me3, hESC.ChIPSeq.list$H3K27me3, genome.size=gs.RNASeq) go.obj <- testGeneOverlap(go.obj) head(getListB(go.obj)) getTested(go.obj) # true. setListB(go.obj) <- hESC.ChIPSeq.list$H3K9me3 getTested(go.obj) # false.