bin_columns_into_quantiles {EWCE} | R Documentation |
bin_columns_into_quantiles
is an internal function used to convert a
matrix of specificity (with columns of cell types) intom a matrix of
specificity quantiles
bin_columns_into_quantiles(matrixIn, numberOfBins = 40)
matrixIn |
The matrix of specificity values |
numberOfBins |
Number of quantile 'bins' to use (40 is recommended) |
A matrix with same shape as matrixIn but with columns storing quantiles instead of specificity
library(ewceData) ctd <- ctd() ctd[[1]]$specificity_quantiles <- apply(ctd[[1]]$specificity, 2, FUN = bin_columns_into_quantiles, numberOfBins = 40 )