element_funs {BiocSet} | R Documentation |
BiocSet
objectAll of the major methods applied to a BiocSet
object can
be explicitly applied to the element tibble. These functions bypass the
need to use the es_activate
function by indicating what function
should be used on the element tibble.
filter_element(.data, ...) select_element(.data, ...) mutate_element(.data, ...) summarise_element(.data, ...) arrange_element(.data, ...) left_join_element(.data, ...) tibble_from_element(.data, how = unlist) data.frame_from_element(.data, how = unlist)
.data |
A |
... |
Additional arguments passed to the function. |
how |
Multiple entries will become a list. |
A BiocSet
object.
For tibble_from_element
, a tibble.
For data.frame_from_element
, a data.frame.
es <- BiocSet(set1 = letters, set2 = LETTERS) filter_element(es, element == "a") es %>% select_element(element) es %>% mutate_element(pval = rnorm(1:52)) es %>% summarise_element(n = n()) es %>% arrange_element(desc(element)) tbl <- tibble(x = 1:5, y = letters[1:5]) es <- BiocSet(set1 = letters[c(1,3,5)], set2 = letters[c(2,4)]) left_join_element(es, tbl, by = c(element = "y")) tibble_from_element(es) data.frame_from_element(es)