Runs-class {BaseSpaceR} | R Documentation |
Runs
and RunsSummary
objectsClasses and methods to handle the Runs resource.
The Runs resource contains the raw data produced by the instruments, the base calls, together with run metrics, instrument health data, and other information used for data processing and analysis.
listRuns(x, ...)
lists all the available runs visable to the user, returning
only a small summary for each run.
is an AppAuth
object.
Parameters supported by the REST API, specified as
name = value
. For example,
listRuns(x, Limit = 2, Statuses = "Failed")
Runs()
:
Instantiates an empty Runs
object. Same as new("Runs")
.
Runs(x, id)
:
x
is an AppAuth
object.
id
is either and integer or a character string storing an
integer. id
can have length larger that 1.
Runs(x)
:
x
is an RunsSummary
object.
Adrian Alexa
https://developer.basespace.illumina.com/docs/content/documentation/rest-api/api-reference
data(aAuth) r <- listRuns(aAuth) r listRuns(aAuth, Statuses = "Failed") # no faild runs listRuns(aAuth, Statuses = "Complete") listRuns(aAuth, SortBy = "Id", SortDir="Desc") Runs(r)[[1]] Runs(aAuth, id = 101102) Runs(r) Runs(aAuth, id = c(Id(r), "11111")) # the third element must be NULL