Hierarchical ensemble method based on factor graph

Documentation for package ‘fgga’ version 1.0.0

fgga-package	FGGA: Factor Graph Gene ontology Annotation.
CfData	A set of characterized protein coding genes from the Cannis familiaris organism annotated to a target GO subgraph considering both experimental and electronic evidence.
createFolds	Data splitting function useful for binary classification tasks
fgga	Factor Graph GO Annotation model
fgga2bipartite	Forney Factor Graph model
msgFGGA	Message passing algorithm between nodes of the Forney Factor Graph
preCoreFG	Transitive closure processing of a GO DAG
svmGO	GO-term predictions by binary SVM classifiers
svmTrain	Binary SVM classification models for individual GO-term predictions
tableTPG	Valid configurations for hidden variable nodes in a Forney Factor Graph
varianceGO	The variance of the gaussian learning noise at individual GO-terms