convert_f_defaults | Rename columns and add defaults values if column not present |
convert_to_ | Convert a network to run under the method of interest. |
convert_to_gsva | Convert a network to run under the method of interest. |
convert_to_mean | Convert a network to run under the method of interest. |
convert_to_ora | Convert a network to run under the method of interest. |
convert_to_pscira | Convert a network to run under the method of interest. |
convert_to_scira | Convert a network to run under the method of interest. |
convert_to_viper | Convert a network to run under the method of interest. |
decouple | Evaluate multiple statistics with same input data |
filter_regulons | Filter network by size of regulons |
run_gsva | GSVA wrapper |
run_mean | Weighted mean |
run_ora | Over Representation Analysis - Fisher Exact Test |
run_pscira | PSCIRA (Permutation Single Cell Inference of Regulatory Activity) |
run_scira | SCIRA (Single Cell Inference of Regulatory Activity) |
run_viper | VIPER wrapper |