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| MatrixRider-package | Calculate total affinity and occupancies for binding site matrices on a given sequence |
| getSeqOccupancy | Computes the total affinity or the occupancy at a given cutoff |
| getSeqOccupancy-method | Computes the total affinity or the occupancy at a given cutoff |
| getSeqOccupancy-methods | Computes the total affinity or the occupancy at a given cutoff |
| MatrixRider | Calculate total affinity and occupancies for binding site matrices on a given sequence |