Detection of Differentially Methylated Regions

Documentation for package ‘DMRScan’ version 1.14.0

DMRScan_package-package	DMRScan: An R-package for identification of Differentially Metylated Regions
dmrscan	DMR Scan function
DMRScan.methylationData	DMRScan
DMRScan.phenotypes	DMRScan
DMRScan_package	DMRScan: An R-package for identification of Differentially Metylated Regions
estimateThreshold	EstimateWindowThresholds
estimateWindowThreshold	EstimateWindowThresholds
makeCpGgenes	Cluster
makeCpGregions	Cluster
manyWindowSizeScanner	Method Fixed window size scan for a sequence of window sizes
manyWindowSizeScanner-method	Method Fixed window size scan for a sequence of window sizes
oneWindowSizeScanner	Method Fixed window size scan for one window size
oneWindowSizeScanner-method	Method Fixed window size scan for one window size
Rt	Method Fixed window size scan for one window size
Rt-method	Method Fixed window size scan for one window size
St	Method Fixed window size scan for a sequence of window sizes