Affymetrix Rat Expression Set 230 annotation data (chip rae230a)


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Documentation for package ‘rae230a.db’ version 2.2.0

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rae230a Bioconductor annotation data package
rae230aACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
rae230aALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rae230aCHR Map Manufacturer IDs to Chromosomes
rae230aCHRLENGTHS A named vector for the length of each of the chromosomes
rae230aCHRLOC Map Manufacturer IDs to Chromosomal Location
rae230aENSEMBL Map Ensembl gene accession numbers with manufacturer identifiers
rae230aENSEMBL2PROBE Map Ensembl gene accession numbers with manufacturer identifiers
rae230aENTREZID Map between Manufacturer Identifiers and Entrez Gene
rae230aENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
rae230aENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
rae230aGENENAME Map between Manufacturer IDs and Genes
rae230aGO Map between Manufacturer IDs and Gene Ontology (GO)
rae230aGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
rae230aGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
rae230aLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rae230aMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
rae230aMAPCOUNTS Number of mapped keys for the maps in package rae230a.db
rae230aORGANISM The Organism for rae230a
rae230aPATH Mappings between probe identifiers and KEGG pathway identifiers
rae230aPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
rae230aPFAM Map Manufacturer IDs to Pfam IDs
rae230aPMID Map between Manufacturer Identifiers and PubMed Identifiers
rae230aPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
rae230aPROSITE Map Manufacturer IDs to PROSITE ID
rae230aREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rae230aSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rae230aUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rae230a_dbconn Collect information about the package annotation DB
rae230a_dbfile Collect information about the package annotation DB
rae230a_dbInfo Collect information about the package annotation DB
rae230a_dbschema Collect information about the package annotation DB