\HeaderA{ptrhomologyLL2HGID}{Mappings between public database identifiers and NCBI's Internal
HomoloGeneIDs for Pan troglodytes}{ptrhomologyLL2HGID}
\aliasA{ptrhomologyACC2HGID}{ptrhomologyLL2HGID}{ptrhomologyACC2HGID}
\aliasA{ptrhomologyHGID2ACC}{ptrhomologyLL2HGID}{ptrhomologyHGID2ACC}
\aliasA{ptrhomologyHGID2LL}{ptrhomologyLL2HGID}{ptrhomologyHGID2LL}
\keyword{datasets}{ptrhomologyLL2HGID}
\begin{Description}\relax
R environments that provides mappings between public database identifiers and internal
HomoloGeneIDs (HGID) used by NCBI to represent sequences for
Pan troglodytes. Public database identifiers include Entrez Gene identifiers (LL) and GenBank
Accesion/RefSeq numbers (ACC).
\end{Description}
\begin{Details}\relax
Each R environment provides mapping between either HomoloGeneIds and
database identifiers. or the converse. The mapping direction is indicated by
the name of the environment. For instance, ptrhomologyACC2HGID provides
mappings between GenBank accession numbers and HomoloGeneIds.

For each environment, a given identifier will map to a named vector of identifiers.
the names of which are the NCBI code for that organism.

Mappings contained were based on data provided by HomoloGene.

HomoloGene:\bsl{}url{ ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp}. Built: HomoloGene built date not available

Packagebuilt Fri Mar 16 11:04:57 2007
\end{Details}
\begin{References}\relax
\url{http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene}
\end{References}
\begin{Examples}
\begin{ExampleCode}
    require("annotate") || stop("annotate unavailable")
    xx <- as.list(ptrhomologyLL2HGID)
        if(length(xx) > 5){
                # Get the value of the first key
                xx[2]
                # Get the value for a few keys
                if(length(xx) >= 3){
                        xx[2:4]
                }
        }
\end{ExampleCode}
\end{Examples}

