ncrhomologyHGID {ncrhomology}R Documentation

A vector containing all the HomoloGeneIDs for Neurospora crassa

Description

ncrhomologyHGID is a vector containing all the HomoloGeneIDs for Neurospora crassa. A HomoloGeneID is a unique identifier used by NCBI to represent a sequence in a given organism

Details

The HomoloGeneIDs can be used to obtain data for all the homologous genes in other organisms using the environment ncrhomologyDATA.

ncrhomologyDATA is an R environment that maps HomoloGeneIds from Neurospora crassa to other species. Consult the ncrhomologyDATA help page for more information.

Mappings contained in homology5141 were based on data provided by HomoloGene.

HomoloGene: ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp. Built: HomoloGene built date not available

Packagebuilt Fri Mar 16 11:04:57 2007

References

http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene

Examples

    require("annotate") || stop("annotate unavailable")
    get(ncrhomologyHGID[1], ncrhomologyDATA)

[Package ncrhomology version 2.0.2 Index]