FHCRC Nelson Lab mpedbarray Annotation Data (mpedbarray)


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Documentation for package ‘mpedbarray’ version 2.2.0

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mpedbarray Bioconductor annotation data package
mpedbarrayACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
mpedbarrayCHR Map Manufacturer IDs to Chromosomes
mpedbarrayCHRLENGTHS A named vector for the length of each of the chromosomes
mpedbarrayCHRLOC Map Manufacturer IDs to Chromosomal Location
mpedbarrayENTREZID Map between Manufacturer Identifiers and Entrez Gene
mpedbarrayENZYME Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
mpedbarrayENZYME2PROBE Map Between Enzyme Commission Numbers and Manufacturer Identifiers
mpedbarrayGENENAME Map Between Manufacturer IDs and Genes
mpedbarrayGO Map between Manufacturer IDs and Gene Ontology (GO)
mpedbarrayGO2ALLPROBES Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
mpedbarrayGO2PROBE Map Between Gene Ontology (GO) and Manufacturer Identifiers
mpedbarrayLOCUSID Map between Manufacturer Identifiers and Entrez Gene
mpedbarrayMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
mpedbarrayMAPCOUNTS Quality control information for mpedbarray
mpedbarrayORGANISM The Organism for mpedbarray
mpedbarrayPATH Mappings between probe identifiers and KEGG pathway identifiers
mpedbarrayPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
mpedbarrayPFAM Map Manufacturer IDs to Pfam IDs
mpedbarrayPMID Map between Manufacturer Identifiers and PubMed Identifiers
mpedbarrayPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
mpedbarrayPROSITE Map Manufacturer IDs to PROSITE ID
mpedbarrayQC Quality control information for mpedbarray
mpedbarrayQCDATA Quality control information for mpedbarray
mpedbarrayREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
mpedbarraySYMBOL Map between Manufacturer Identifiers and Gene Symbols
mpedbarrayUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers