m10kcod_dbconn {m10kcod.db} | R Documentation |
Some convenience functions for getting a connection object to (or collecting information about) the package annotation DB.
m10kcod_dbconn() m10kcod_dbfile() m10kcod_dbschema(file="", show.indices=FALSE) m10kcod_dbInfo()
file |
A connection, or a character string naming the file to print to (see
the file argument of the cat function for
the details).
|
show.indices |
The CREATE INDEX statements are not shown by default.
Use show.indices=TRUE to get them.
|
m10kcod_dbconn
returns a connection object to the package
annotation DB.
IMPORTANT: Don't call dbDisconnect
on the connection
object returned by m10kcod_dbconn
or you will
break all the AnnDbObj
objects defined in this package!
m10kcod_dbfile
returns the path (character string) to the
package annotation DB (this is an SQLite file).
m10kcod_dbschema
prints the schema definition of the
package annotation DB.
m10kcod_dbInfo
prints other information about the package
annotation DB.
m10kcod_dbconn
: a DBIConnection object representing an open
connection to the package annotation DB.
m10kcod_dbfile
: a character string with the path to the
package annotation DB.
m10kcod_dbschema
: none (invisible NULL
).
m10kcod_dbInfo
: none (invisible NULL
).
dbGetQuery
,
dbConnect
,
dbconn
,
dbfile
,
dbschema
,
dbInfo
## Count the number of rows in the "probes" table: dbGetQuery(m10kcod_dbconn(), "SELECT COUNT(*) FROM probes") ## The connection object returned by m10kcod_dbconn() was created with: dbConnect(SQLite(), dbname=m10kcod_dbfile(), cache_size=64000, synchronous=0) m10kcod_dbschema() m10kcod_dbInfo()