# Illumina Sentrix RatRef-12 version 1 Annotation Data (lumiRatV1)

## Documentation for package ‘lumiRatV1’ version 1.3.1

## Help Pages

lumiRatV1 | Bioconductor annotation data package
lumiRatV1ACCNUM | Map Manufacturer identifiers to GenBank Accession Numbers
lumiRatV1CHR | Map Manufacturer IDs to Chromosomes
lumiRatV1CHRLENGTHS | A named vector for the length of each of the chromosomes
lumiRatV1CHRLOC | Map Manufacturer IDs to Chromosomal Location
lumiRatV1ENTREZID | Map between Manufacturer Identifiers and Entrez Gene
lumiRatV1ENZYME | Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
lumiRatV1ENZYME2PROBE | Map Between Enzyme Commission Numbers and Manufacturer Identifiers
lumiRatV1GENENAME | Map Between Manufacturer IDs and Genes
lumiRatV1GO | Map between Manufacturer IDs and Gene Ontology (GO)
lumiRatV1GO2ALLPROBES | Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
lumiRatV1GO2PROBE | Map Between Gene Ontology (GO) and Manufacturer Identifiers
lumiRatV1LOCUSID | Map between Manufacturer Identifiers and Entrez Gene
lumiRatV1MAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
lumiRatV1MAPCOUNTS | Quality control information for lumiRatV1
lumiRatV1ORGANISM | The Organism for lumiRatV1
lumiRatV1PATH | Mappings between probe identifiers and KEGG pathway identifiers
lumiRatV1PATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
lumiRatV1PFAM | Map Manufacturer IDs to Pfam IDs
lumiRatV1PMID | Map between Manufacturer Identifiers and PubMed Identifiers
lumiRatV1PMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
lumiRatV1PROBEID2NUID | Map between Illumina ProbeID and nuID
lumiRatV1PROSITE | Map Manufacturer IDs to PROSITE ID
lumiRatV1QC | Quality control information for lumiRatV1
lumiRatV1QCDATA | Quality control information for lumiRatV1
lumiRatV1REFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
lumiRatV1SUMFUNC | Map between Manufacturer Identifiers and Gene Function Summaries
lumiRatV1SYMBOL | Map between Manufacturer Identifiers and Gene Symbols
lumiRatV1TARGETID2NUID | Map between Illumina TargetID and nuID
lumiRatV1UNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers