Affymetrix HuGeneFL Genome Array annotation data (chip hu6800)


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Documentation for package ‘hu6800.db’ version 2.2.0

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hu6800 Bioconductor annotation data package
hu6800ACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
hu6800ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hu6800CHR Map Manufacturer IDs to Chromosomes
hu6800CHRLENGTHS A named vector for the length of each of the chromosomes
hu6800CHRLOC Map Manufacturer IDs to Chromosomal Location
hu6800ENSEMBL Map Ensembl gene accession numbers with manufacturer identifiers
hu6800ENSEMBL2PROBE Map Ensembl gene accession numbers with manufacturer identifiers
hu6800ENTREZID Map between Manufacturer Identifiers and Entrez Gene
hu6800ENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hu6800ENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hu6800GENENAME Map between Manufacturer IDs and Genes
hu6800GO Map between Manufacturer IDs and Gene Ontology (GO)
hu6800GO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hu6800GO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hu6800LOCUSID Map between Manufacturer Identifiers and Entrez Gene
hu6800MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hu6800MAPCOUNTS Number of mapped keys for the maps in package hu6800.db
hu6800OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hu6800ORGANISM The Organism for hu6800
hu6800PATH Mappings between probe identifiers and KEGG pathway identifiers
hu6800PATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hu6800PFAM Map Manufacturer IDs to Pfam IDs
hu6800PMID Map between Manufacturer Identifiers and PubMed Identifiers
hu6800PMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hu6800PROSITE Map Manufacturer IDs to PROSITE ID
hu6800REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hu6800SYMBOL Map between Manufacturer Identifiers and Gene Symbols
hu6800UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hu6800_dbconn Collect information about the package annotation DB
hu6800_dbfile Collect information about the package annotation DB
hu6800_dbInfo Collect information about the package annotation DB
hu6800_dbschema Collect information about the package annotation DB