agACCNUM {ag}R Documentation

Map Manufacturer identifiers to GenBank Accession Numbers

Description

agACCNUM is an R environment that contains mappings between a manufacturer's identifiers and GenBank accession numbers.

Details

This environment was produced by first mapping the manufacturer's identifiers to Entrez Gene identifiers http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene. The mapped Entrez Gene identifiers then serve as the point of linkage to the GenBank accession numbers.

Each manufacturer identifier maps to a vector containing a GenBank accession number.

Package built: Fri Aug 24 17:42:16 2007

Examples

        # Convert to a list
        xx <- as.list(agACCNUM)
        # Remove probe identifiers that do not map to any ACCNUM
        xx <- xx[!is.na(xx)]
        if(length(xx) > 0){
        # Get the ACCNUM for the first five probes
        xx[1:5]
        # Get the first one
        xx[[1]]
}

[Package ag version 2.2.0 Index]