FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3)


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Documentation for package ‘OperonHumanV3.db’ version 2.2.0

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OperonHumanV3 Bioconductor annotation data package
OperonHumanV3ACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
OperonHumanV3ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
OperonHumanV3CHR Map Manufacturer IDs to Chromosomes
OperonHumanV3CHRLENGTHS A named vector for the length of each of the chromosomes
OperonHumanV3CHRLOC Map Manufacturer IDs to Chromosomal Location
OperonHumanV3ENSEMBL Map Ensembl gene accession numbers with manufacturer identifiers
OperonHumanV3ENSEMBL2PROBE Map Ensembl gene accession numbers with manufacturer identifiers
OperonHumanV3ENTREZID Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3ENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
OperonHumanV3ENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
OperonHumanV3GENENAME Map between Manufacturer IDs and Genes
OperonHumanV3GO Map between Manufacturer IDs and Gene Ontology (GO)
OperonHumanV3GO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
OperonHumanV3GO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
OperonHumanV3LOCUSID Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
OperonHumanV3MAPCOUNTS Number of mapped keys for the maps in package OperonHumanV3.db
OperonHumanV3OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
OperonHumanV3ORGANISM The Organism for OperonHumanV3
OperonHumanV3PATH Mappings between probe identifiers and KEGG pathway identifiers
OperonHumanV3PATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
OperonHumanV3PFAM Map Manufacturer IDs to Pfam IDs
OperonHumanV3PMID Map between Manufacturer Identifiers and PubMed Identifiers
OperonHumanV3PMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
OperonHumanV3PROSITE Map Manufacturer IDs to PROSITE ID
OperonHumanV3REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
OperonHumanV3SYMBOL Map between Manufacturer Identifiers and Gene Symbols
OperonHumanV3UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
OperonHumanV3_dbconn Collect information about the package annotation DB
OperonHumanV3_dbfile Collect information about the package annotation DB
OperonHumanV3_dbInfo Collect information about the package annotation DB
OperonHumanV3_dbschema Collect information about the package annotation DB