GOSYNONYM {GO} | R Documentation |
This data set gives mappings between GO synonyms and their respective terms.
Each GO synonym is mapped to a GOTerms
object that has 6 slots:
Synonyms of obsolete GO terms are not included.
Mappings were based on data provided by:
Gene Ontology:http://gopher5/compbio/annotationSourceData/archive.godatabase.org/latest/. Built: 08-Feb-2007
Package built: Fri Mar 2 13:37:12 2007
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene
require("GO") || stop("GO unavailable") require("annotate") || stop("annotate unavailable") # Convert the environment object to a list xx <- as.list(GOSYNONYM) if(length(xx) > 0){ # Get the TERMS for the first elent of xx GOID(xx[[1]]) Term(xx[[1]]) Synonym(xx[[1]]) Secondary(xx[[1]]) Definition(xx[[1]]) Ontology(xx[[1]]) }