athhomologyHGID {athhomology}R Documentation

A vector containing all the HomoloGeneIDs for Arabidopsis thaliana

Description

athhomologyHGID is a vector containing all the HomoloGeneIDs for Arabidopsis thaliana. A HomoloGeneID is a unique identifier used by NCBI to represent a sequence in a given organism

Details

The HomoloGeneIDs can be used to obtain data for all the homologous genes in other organisms using the environment athhomologyDATA.

athhomologyDATA is an R environment that maps HomoloGeneIds from Arabidopsis thaliana to other species. Consult the athhomologyDATA help page for more information.

Mappings contained in homology3702 were based on data provided by HomoloGene.

HomoloGene: ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp. Built: HomoloGene built date not available

Packagebuilt Tue Nov 21 18:37:08 2006

References

http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene

Examples

    require("annotate") || stop("annotate unavailable")
    get(athhomologyHGID[1], athhomologyDATA)

[Package athhomology version 1.14.2 Index]