YEASTPFAM {YEAST}R Documentation

Map Yeast Systematic Names to Pfam IDs

Description

YEASTPFAM is an R environment that provides mappings between yeast systematic names and the associated Pfam identifiers.

Details

Each yeast systematic name maps to a vector of Pfam identifiers.

Mappings were based on data provided by:

Saccharomyces Genome Database

Package built on Fri Oct 20 16:37:16 2006

References

Pfam website: http://www.sanger.ac.uk/Software/Pfam/ and Data source http://gopher5/compbio/annotationSourceData/ftp.yeastgenome.org/pub/yeast/sequence_similarity/domains/domains.tab

Examples

        # Convert to a list
        xxx <- as.list(YEASTPFAM)
        # randomly display 10 probes
        sample(xxx, 10)

[Package YEAST version 1.14.2 Index]