pfamPFAMB2AC {PFAM} | R Documentation |
Mapping function from PFAMB ID (PFAMB) to the associated Accession number (AC)
pfamPFAMB2AC(pfamb=NULL)
pfamb |
A character vector of PFAMB ID or NULL (default) |
If pfamb
is a vector of PFAMB ID, pfamPFAMB2AC will
return a list of associated Accession number for the given pfamb
. If
pfamb
is NULL, pfamPFAMB2AC(pfamb=NULL) (or pfamPFAMB2AC())
will return a list of associated Accession number for all the PFAMB ID in
the database.
Extra information: None
More Details: Pfam-B is an automatic clustering of the rest of SWISSPROT and TrEMBL derived from the PRODOM database.
A list of Accession number.
Ting-Yuan Liu
http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt
## Not run: PFAMB2AC <- pfamPFAMB2AC() head(PFAMB2AC) pfamPFAMB2AC(pfamb=sample(names(PFAMB2AC), 3)) ## End(Not run)