pfamTP2AC {PFAM}R Documentation

Mappings from Type field to Accession number

Description

Mapping function from Type field (TP) to the associated Accession number (AC)

Usage

pfamTP2AC(tp=NULL)

Arguments

tp A character vector of Type field or NULL (default)

Details

If tp is a vector of Type field, pfamTP2AC will return a list of associated Accession number for the given tp. If tp is NULL, pfamTP2AC(tp=NULL) (or pfamTP2AC()) will return a list of associated Accession number for all the Type field in the database. Extra information: None More Details: None

Value

A list of Accession number.

Author(s)

Ting-Yuan Liu

References

http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt

Examples

## Not run: 
    TP2AC <- pfamTP2AC()
    head(TP2AC)
    pfamTP2AC(tp=sample(names(TP2AC), 3))
## End(Not run)

[Package PFAM version 1.14.1 Index]