pfamAC2CAZY {PFAM} | R Documentation |
Mapping function from Accession number (AC) to the associated CAZY ID (CAZY)
pfamAC2CAZY(ac=NULL)
ac |
A character vector of Accession number or NULL (default) |
If ac
is a vector of Accession number, pfamAC2CAZY will
return a list of associated CAZY ID for the given ac
. If
ac
is NULL, pfamAC2CAZY(ac=NULL) (or pfamAC2CAZY())
will return a list of associated CAZY ID for all the Accession number in
the database.
Extra information: None
More Details: The CAZy database (http://afmb.cnrs-mrs.fr/CAZY/) describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.
A list of CAZY ID.
Ting-Yuan Liu
http://www.sanger.ac.uk/Software/Pfam/ and ftp://ftp.sanger.ac.uk/pub/databases/Pfam/current_release/userman.txt
## Not run: AC2CAZY <- pfamAC2CAZY() head(AC2CAZY) pfamAC2CAZY(ac=sample(names(AC2CAZY), 3)) ## End(Not run)