arrplot1 |
Function to calculate relative mean squares |
arrplotd |
Function for plotting a smoothed histogram |
arrplote |
Function for plotting a cumulative frequency distribution |
beams |
Beam search rountine for finding the optimal parameters |
dplot |
Plotting smoothed histogram |
dplote |
Plotting cumulative frequency distribution |
genediff |
Raw p-value calculation function |
glog |
Generalized log transformation function |
jggrad2 |
Generating Jacobian-corrected data |
jglog |
Glog |
LMGene |
LMGene main function |
lnorm |
Lowess normalization function |
mlm2lm |
Linear Model converting function |
msa |
Relative mean square calculation function |
msecalc |
MSE calculation function |
neweS |
Coercing to exprSet function |
norm |
Additive normalization function |
pvadjust |
P-value adjusting function |
rgplot |
Plotting density function |
rowaov |
Gene by gene anova functioin |
rowlist |
Gene name listing function |
Smpd |
Sample array data for LMGene package |
Smpd0 |
Sample array data for LMGene |
tranest |
Glog transformation parameter estimation function |
tranest2 |
Glog transformation parameter estimation function 2 |
vlist |
Sample experimental data for LMGene package |