\HeaderA{rwgcodPATH2PROBE}{Map between Kyoto Encyclopedia of Genes and Genomes (KEGG)
pathway identifiers and Manufacturer Identifiers}{rwgcodPATH2PROBE}
\keyword{datasets}{rwgcodPATH2PROBE}
\begin{Description}\relax
rwgcodPATH2PROBE is an R environment that provides mappings between
KEGG ids and manufacturer ids.
\end{Description}
\begin{Details}\relax
Each KEGG id is mapped to a named vector of manufacturer ids. The name
represents the KEGG id and the vector contains all manufacturer ids
that are found in that particular pathway. An \code{NA} is reported
for any KEGG id that cannot be mapped to any manufacturer ids.

Pathway name for a given pathway id can be obtained using the KEGG
data package that can either be built using AnnBuilder or downloaded
from Bioconductor \url{http://www.bioconductor.org}.

Graphic presentations of pathways are searchable at
\url{http://www.genome.ad.jp/kegg/pathway.html} using pathway ids as keys.

Mappings were based on data provided by:

KEGG:\url{ftp://ftp.genome.ad.jp/pub/kegg/tarfiles/pathway.tar.gz}. Built: Release 38.1, June 1, 2006

Entrez Gene:\url{ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/}. Built: Source data downloaded from Entrez Gene on Thu Jun 22 15:18:29 2006

Package built Thu Jun 22 15:50:19 2006
\end{Details}
\begin{References}\relax
\url{http://www.genome.ad.jp/kegg/}
\end{References}
\begin{Examples}
\begin{ExampleCode}
    # Convert the environment to a list
    xx <- as.list(rwgcodPATH2PROBE)
    # Remove pathway ids that do not map to any probe id
    xx <- xx[!is.na(xx)]
    if(length(xx) > 0){
        # The probe ids for the first two elements of XX
        xx[1:2]
        # Get the first one
        xx[[1]]
    } 
\end{ExampleCode}
\end{Examples}

