h20kcodOMIM {h20kcod} | R Documentation |
h20kcodOMIM is an R environment that provides mappings between manufacturer ids and OMIM ids.
Each manufacturer id is mapped to a vector of OMIM ids. The vector
length may be one or longer, depending on how many OMIM ids the
manufacturer id maps to. An NA
is reported for any manufacturer
id that cannot be mapped to an OMIM id at this time.
OMIM is based upon the book Mendelian Inheritance in Man (V. A. McKusick) and focuses primarily on inherited or heritable genetic diseases. It contains textual information, pictures, and reference information that can be searched using various terms, among which the MIM number is one.
Mappings were based on data provided by:
Entrez Gene:ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/. Built: Source data downloaded from Entrez Gene on Thu Jun 22 12:24:27 2006
Package built Thu Jun 22 12:55:19 2006
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene http://www3.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM
# Convert the environment to a list xx <- as.list(h20kcodOMIM) # Remove probe ids that do not map to any MIM number xx <- xx[!is.na(xx)] if(length(xx) > 0){ # The MIM numbers for the first two elements of XX xx[1:2] # Get the first one xx[[1]] }