ggahomologyHGID {ggahomology}R Documentation

A vector containing all the HomoloGeneIDs for Gallus gallus

Description

ggahomologyHGID is a vector containing all the HomoloGeneIDs for Gallus gallus. A HomoloGeneID is a unique identifier used by NCBI to represent a sequence in a given organism

Details

The HomoloGeneIDs can be used to obtain data for all the homologous genes in other organisms using the environment ggahomologyDATA.

ggahomologyDATA is an R environment that maps HomoloGeneIds from Gallus gallus to other species. Consult the ggahomologyDATA help page for more information.

Mappings contained in homology9031 were based on data provided by HomoloGene.

HomoloGene: ftp://ftp.ncbi.nih.gov/pub/HomoloGene/old/hmlg.ftp. Built: HomoloGene built date not available

Packagebuilt Sun Mar 26 00:44:32 2006

References

http://www.ncbi.nih.gov/entrez/query.fcgi?db=homologene

Examples

    require("annotate") || stop("annotate unavailable")
    get(ggahomologyHGID[1], ggahomologyDATA)

[Package ggahomology version 1.12.0 Index]