YEASTINTERPRO {YEAST}R Documentation

Map Yeast Systematic Names to InterPro IDs

Description

YEASTINTERPRO is an R environment that provides mappings between yeast systematic names and the associated InterPro ids.

Details

Each yeast systematic name maps to a vector of InterPro ids.

Mappings were based on data provided by:

Saccharomyces Genome Database

Package built on Sat Mar 25 22:20:25 2006

References

InterPro website: http://www.ebi.ac.uk/interpro/ and Data source: http://gopher5/compbio/annotationSourceData/ftp.yeastgenome.org/pub/yeast/sequence_similarity/domains/domains.tab

Examples

        # Convert to a list
        xxx <- as.list(YEASTINTERPRO)
        # randomly display 10 probes
        sample(xxx, 10)

[Package YEAST version 1.12.0 Index]