S-Score Algorithm for Affymetrix Oligonucleotide Microarrays


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Documentation for package ‘sscore’ version 1.16.0

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computeAffxRawQ Computes RawQ using affxparser routines
computeAffxSFandSDT Compute SF and SDT values using affxparser routines
computeOutlier Compute outlier probes
computeRawQ Computes RawQ
computeSFandSDT Compute SF and SDT values
computeZoneIInfo Compute zone background and noise
computeZonenoise Computes zone noise
OneStepBiweightAlgorithm One-step Tukey's biweight
SScore Compute S-Score values
SScoreBatch Compute S-Score values
trimMean Compute trimmed mean for a vector