aqm.pmmm {arrayQualityMetrics}R Documentation

Performs perfect match versus mismatch density plots.

Description

aqm.pmmm performs PM MM density curves on objects of class AffyBatch and formats the output for aqm.plot usage.

Usage

 aqm.pmmm(expressionset, ...) 

Arguments

expressionset is an object of class AffyBatch
... Any arguments to density

Value

An object of class aqmobj.pmmm.

Author(s)

Audrey Kauffmann <audrey@ebi.ac.uk>

See Also

aqmobj.pmmm

Examples

    library(ALLMLL)
    data(MLL.A)
    pm = aqm.pmmm(MLL.A)
    class(pm)
    aqm.plot(pm)

[Package arrayQualityMetrics version 2.2.3 Index]