expandKEGGPathway {KEGGgraph} | R Documentation |
The function expands paralogue nodes in KEGG pathway and returns expanded KEGG pathway, KEGG node and edge data is maintained.
expandKEGGPathway(pathway)
pathway |
An object of KEGGPathway-class |
The function expands nodes with paralogues in KEGG pathway and copy neccessary edges.
An object of KEGGPathway-class
Jitao David Zhang mailto:j.zhang@dkfz.de
sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph") kegg.pathway <- parseKGML(sfile) kegg.expandpathway <- expandKEGGPathway(kegg.pathway)