RankingPermutation-methods {GeneSelector}R Documentation

Ranking based on permutation tests.

Description

The function is a wrapper for mt.sample.teststat from the package multtest. The ranking is here based on permutation p-values first, followed by the absolute value of the statistic.

Methods

The input (gene expression and class labels) can be given in three different ways:

x = "matrix", y = "numeric"
signature 1
x = "matrix", y = "factor"
signature 2
x = "ExpressionSet", y = "character"
signature 3

For further argument and output information, consult RankingPermutation.


[Package GeneSelector version 1.2.0 Index]