CombinedRanking-class {GeneSelector} | R Documentation |
Object returned from a call to GeneSelector
.
ranking
:rankmatrix
:ranking
, the first row contains
the rankings of the gene with the first index.
This slot is used rather for internal reasons.inout
:rankmatrix
,
but information is now binary: If the specified threshold,
then there is a "+"
symbolizing selection,
whereas a "-"
symbolizes removal.selected
:SelectedGenes
adjpval
:ranking
. NA
if
no adjustment has been taken place (in the case
that the threshold was fixed by the user).maxrank
:statistics
:absdist
:L1
) distance from (theoretically)
best possible result (rank 1 in all rankings),
ordered according to ranking
. Note
that minimum absdist
does not imply
best rank and vice versa, because the computed
distance does not weigh different statistics
differently.reldist
:absdist
(lies in [0;1]).show(object)
for brief information.toplist(object, k=10)
to get information about the top k=10
genes.SelectedGenes(object)
to show all genes that
have been selected by the GeneSelector.GeneInfoScreen, which=1
to get detailed
information about the gene with index 1, arranged in
a pretty plot.plot(object)
to visualize relative distances,
s. plot,CombinedRanking
Martin Slawski martin.slawski@campus.lmu.de
Anne-Laure Boulesteix http://www.slcmsr.net/boulesteix