Qualitiy control for flow cytometry


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Documentation for package ‘flowQ’ version 1.0.0

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flowQ-package Quality control for flow cytometry
aggregatorList Class "aggregatorList"
aggregatorList-class Class "aggregatorList"
binaryAggregator Class "binaryAggregator"
binaryAggregator-class Class "binaryAggregator"
discreteAggregator Class "discreteAggregator"
discreteAggregator-class Class "discreteAggregator"
evaluateProcess Evaluate QA processes
factorAggregator Class "factorAggregator"
factorAggregator-class Class "factorAggregator"
flowQ Quality control for flow cytometry
initialize,aggregatorList-method Class "aggregatorList"
initialize,qaGraph-method Class "qaGraph"
initialize,qaGraphList-method Class "qaGraphList"
initialize,qaProcess-method Abstraction of the results of a QA process
initialize,qaProcessFrame-method Class "qaProcessFrame"
names,qaGraph-method Class "qaGraph"
numericAggregator Class "numericAggregator"
numericAggregator-class Class "numericAggregator"
outlier-class Virtual Class "outlier"
outlierResult-class Class "outlierResult"
outliers ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
outliers,flowSet-method ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
outliers-methods ~~ Methods for Function outliers in Package ‘.GlobalEnv’ ~~
qaAggregator Abstraction of the possible outcomes of a QA process
qaAggregator-class Abstraction of the possible outcomes of a QA process
qaGraph Class "qaGraph"
qaGraph-class Class "qaGraph"
qaGraphList Class "qaGraphList"
qaGraphList-class Class "qaGraphList"
qaProcess Abstraction of the results of a QA process
qaProcess-class Abstraction of the results of a QA process
qaProcess.marginevents Create QA process of type 'marginevents'
qaProcess.timeline Create QA process of type 'timeline'
qaProcessFrame Class "qaProcessFrame"
qaProcessFrame-class Class "qaProcessFrame"
qaReport Create HTML report using one or several QA process function(s)
rangeAggregator Class "rangeAggregator"
rangeAggregator-class Class "rangeAggregator"
show,aggregatorList-method Class "aggregatorList"
show,binaryAggregator-method Class "binaryAggregator"
show,discreteAggregator-method Class "discreteAggregator"
show,factorAggregator-method Class "factorAggregator"
show,numericAggregator-method Class "numericAggregator"
show,qaGraph-method Class "qaGraph"
show,qaGraphList-method Class "qaGraphList"
show,qaProcess-method Abstraction of the results of a QA process
show,qaProcessFrame-method Class "qaProcessFrame"
show,rangeAggregator-method Class "rangeAggregator"
show,stringAggregator-method Class "stringAggregator"
stringAggregator Class "stringAggregator"
stringAggregator-class Class "stringAggregator"
validProcess Validate a QAProcess object
writeLines,binaryAggregator,file,missing-method Class "binaryAggregator"
writeLines,discreteAggregator,file,missing-method Class "discreteAggregator"
writeLines,factorAggregator,file,missing-method Class "factorAggregator"
writeLines,numericAggregator,file,missing-method Class "numericAggregator"
writeLines,rangeAggregator,file,missing-method Class "rangeAggregator"
writeLines,stringAggregator,file,missing-method Class "stringAggregator"
writeQAReport Create HTML report for (lists of) qaProcess objects