oGtypeExSet-class {GGBase} | R Documentation |
Class "oGtypeExSet" oligo-based genotyping output + expression set container – obsolete
Objects can be created by calls of the form new("oGtypeExSet", assayData, phenoData, featureData, experimentData, annotation, exprs, ...)
.
snpCalls
:"list"
~~ dbConns
:"list"
~~ assayData
:"AssayData"
~~ phenoData
:"AnnotatedDataFrame"
~~ featureData
:"AnnotatedDataFrame"
~~ experimentData
:"MIAME"
~~ annotation
:"character"
~~ .__classVersion__
:"Versions"
~~
Class "ExpressionSet"
, directly, with explicit coerce.
Class "eSet"
, by class "ExpressionSet", distance 2, with explicit coerce.
Class "VersionedBiobase"
, by class "ExpressionSet", distance 3, with explicit coerce.
Class "Versioned"
, by class "ExpressionSet", distance 4, with explicit coerce.
No methods defined with class "oGtypeExSet" in the signature.
This class was designed to combine oligo SNP chip outputs with expression data. This specific workflow is not supported at this time. Convert the oligo outputs to snp.matrix and use smlSet container instead.
showClass("oGtypeExSet")