hmceuAmbB36_23a_dbconn {GGBase}R Documentation

SQLite infrastructure for SNP locations

Description

SQLite infrastructure for SNP locations

Usage

hmceuAmbB36_23a_dbconn()
hmceuAmbB36_23a_dbfile()

Details

hmceuAmbB36 23a refers to HapMap CEU Ambiguous IUPAC symbols denoting SNP for hapmap build 36 version 23a.

Follows conventions of SQLite annotation package RDBMS referencing: the dbconn() function call above evaluates to a SQLiteConnection instance; the dbfile() call evaluates to a string giving the location of the SQLite file holding the location table.

Value

See details.

Author(s)

Vince Carey <stvjc@channing.harvard.edu>

Examples

hmceuAmbB36_23a_dbfile()
con = hmceuAmbB36_23a_dbconn()
tab = dbListTables(con)
dbGetQuery(hmceuAmbB36_23a_dbconn() , paste("select * from", tab, " limit 5"))

[Package GGBase version 2.0.4 Index]